PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00113.1.g00720.1.am.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 280aa    MW: 29628.1 Da    PI: 6.2912
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00113.1.g00720.1.am.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.48.6e-19130180255
                           AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                   +y+GVr+++ +g+++AeIrdp +ng  +r++lg+++ ae+Aa a+++a+ +++g
  Zpz_sc00113.1.g00720.1.am.mk 130 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYDNAEDAAVAYDRAAYRMRG 180
                                   8********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.44E-28129188No hitNo description
Gene3DG3DSA:3.30.730.103.4E-31129188IPR001471AP2/ERF domain
SMARTSM003801.1E-36130194IPR001471AP2/ERF domain
SuperFamilySSF541717.19E-23130190IPR016177DNA-binding domain
PROSITE profilePS5103223.749130188IPR001471AP2/ERF domain
PfamPF008474.1E-12130180IPR001471AP2/ERF domain
PRINTSPR003675.4E-13131142IPR001471AP2/ERF domain
PRINTSPR003675.4E-13170190IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001944Biological Processvasculature development
GO:0010200Biological Processresponse to chitin
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051301Biological Processcell division
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    Send to blast
MLRDPASETA ALDGIRHHLL DEPAPSAAPR PVYCRSTSFS SLVADQWSES LPFRPDDADD  60
MVVFGALRDA FSRGWLPDGS FAAVKPEPVA SPDSYDGSCI GSLLASSEEE PETPTQRREE  120
AAGAVSRGKH YRGVRQRPWG KFAAEIRDPA KNGARVWLGT YDNAEDAAVA YDRAAYRMRG  180
SRALLNFPLR IGSEIAAAAA AAATATAVGD KRPCPEPASS DSSPSSSSSG SPKRRKRGEA  240
AAASMAMALI PPAQPAQAPV QLNLPAQPWF AAGPVQQLVS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3gcc_A4e-38126193168ATERF1
2gcc_A4e-38126193168ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004953322.11e-128PREDICTED: ethylene-responsive transcription factor 2
SwissprotQ404791e-55ERF2_TOBAC; Ethylene-responsive transcription factor 2
TrEMBLK3YUJ51e-128K3YUJ5_SETIT; Uncharacterized protein
STRINGSi017941m1e-127(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38002972
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17500.11e-41ethylene responsive element binding factor 1